CDS

Accession Number TCMCG051C09349
gbkey CDS
Protein Id XP_024450001.1
Location complement(join(24217427..24217588,24217841..24217942,24218116..24218184,24218310..24218378,24218455..24218529,24218630..24218734,24219828..24219929,24220069..24221864,24222060..24222417,24222507..24222605,24224068..24224185,24224283..24224368,24224447..24224515,24224602..24224676,24224819..24224916,24225171..24225332,24226154..24226319,24226548..24226645,24226721..24226730))
Gene LOC7471196
GeneID 7471196
Organism Populus trichocarpa

Protein

Length 1272aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024594233.1
Definition CLIP-associated protein isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description CLASP N terminal
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K16578        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000226        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005876        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007017        [VIEW IN EMBL-EBI]
GO:0007020        [VIEW IN EMBL-EBI]
GO:0007026        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008017        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009524        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030865        [VIEW IN EMBL-EBI]
GO:0031023        [VIEW IN EMBL-EBI]
GO:0031109        [VIEW IN EMBL-EBI]
GO:0031110        [VIEW IN EMBL-EBI]
GO:0031111        [VIEW IN EMBL-EBI]
GO:0031114        [VIEW IN EMBL-EBI]
GO:0031122        [VIEW IN EMBL-EBI]
GO:0031647        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032886        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0034453        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043242        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043622        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046785        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050821        [VIEW IN EMBL-EBI]
GO:0051010        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0051781        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070507        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1901880        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCATCGAGTCGCATTAATCCGACTATTCGTCTTTCAGGAGATGTACTCACAGGCCGGGCCCCAATTCCGTGACGAGCTTCATCGCCATCATCTTCCTAATTCCATGATGAAAGATATCAATGCCAGACTAGAGAGGATTGAACCACAAGTACGCCCTTCAGATGGACTTGGCGGTAACTTTGCTCCTGTTGAGATGAAGCCCACAAGCCTTCATTCCAAGAAAAGCAGTCCAAAAGCCAAAAGTTCCACGAGGGAGATATCTCTTTTTGGAGCGGAGAGTGATGTCACCGAGAAACCCATAGAGCCAATTAAAGTTTACTCAGAAAAGGAGCTAATTAGGGAATTTGAGAAGATTGCGGCTACCCTTGTTCCTGAAAAGGATTGGACTATCCGCATAGCTGCCATGCAGAGAGTTGAAGGCCTTGTTTTGGGAGGTGCTACTGATTACCCATGTTTTCGGGGGCTTCTGAAGCAATTTGTTGGCCCTCTAAACACACAGTTATCTGATCGAAGGTCTAGTGTTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTATCGAAGGATCTGTTGGGAGATTTTGAGGCATGTGCCGAGATGTTCATTCCTGCCCTTTTCAAGCTCGTTGTGATTACTGTACTTGTAATTGCAGAATCTGCAGATAACTGCATAAAAACGATGTTGCGTAACTGTAAAGTTGCTCGTGTGCTTCCTCGCATAGCTGATTGTGCAAAGAATGACCGCGCTGCAGTACTCCGTGCAAGATGTTGCGAATATGCACTATTGATACTTGAACATTGGCCCGATGCTCCTGAAATACAGCGATCTGCTGATCTCTATGAAGATCTGATAAGATGTTGTGTTGCAGACGCAATGAGCGAGGTGCGCTCAACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGTCGTTTATTTATGTCCTTTGATCCTGTTATTCAACGGATTGTTAACGAAGAGGATGGAGGCTTGCACAGGAGACATGCATCTCCTTCCATCCGTGATAGAAGTGCTCAAACATCATTTACCCCTCAGGCATCTGCGGCTTCACATGTACCTGGATATGGAACTTCGGCTATTGTTGCAATGGATAGAACTTCAAGTTTATCCTCTGGGACATCTCTGTCTTCTGGTCTTTTGCTCTCACAAGCAAAGTCCCTTGGTAAAGGTACTGAACGTAGTCTGGAAAGTGTGTTGCACGCTAGTAAGCAGAAGGTCACTGCAATTGAAAGCATGCTTAGAGGTTTGGAATTATCCGACAAACAAAATCCTTCAGCTCTCCGTTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCATCTGTTCCTGCCTCTAATCATCTCACAAACTCTTTGACAGCAGAATCAACTGCTTCTGGTATTGGTAAAGGCAGTAACCGCAATGGTGGCTTGGTCTTGTCTGATATTATTACCCAAATTCAAGCTTCCAAAGATTCTGCTAAGCTATCATATCGGAATAATATGGCAGCCGAGTCTTTGCCAACATTTTCATCATATTCAACAAAGAGGATTTCTGAAAGAGGTTCAGTTGAAGAGGACAATGACATTAGGGAACCTAGGCGATTTGCGAACCCACATGTAGACAGGCAGTATATGGACACGCCTTACAAAGATTTAAACTACAGGGATTCACATAGCAGTCACATCCCCAACTTCCAGAGACCACTTTTGAGAAAGCATGTGGCTGGACGAATGTCTGCGGGCAGGCGAAAGAGTTTTGATGATAGTCAACTCTCACTTGGAGAGGTGTCAAGTTATGTAGAAGGTCCAGCATCTCTCAGCGACGCATTGAGCGAGGGACTTAGTCCAAGTTCTGACTGGAATGCTAGGGTTGCTGCTTTCAATTACCTCCATTCTTTGCTGCAGCAAGGCCCAAAAGGTGTTCAAGAAGTAATTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCATCTGGATGATCCGCATCATAAAGTTGCACAAGCAGCTCTCTCGACACTTGCAGATATTATTCCATCTTGCCGAAAGCCATTTGAGAGTTACATGGAACGGATCTTACCCCATGTTTTCTCCCGATTAATTGACCCAAAGGAGCTAGTCAGGCAACCTTGCTCCACAACTTTGGAAATTGTCAGCAAAACTTATGGGGTTGATATTCTTTTACCAGCATTGCTCCGTTCACTAGATGAGCAGAGGTCACCAAAAGCCAAATTGGCTGTTATTGAGTTTGCCCTCAGTTCATTTAACAAGCATGCAATGAACTCTGAAGGCTCTGGGAATACTGGCATTTTGAAGTTATGGCTTGCTAAGCTGACACCGTTAGTACATGATAAAAATACTAAGCTCAAGGAAGCTGCTATTACTTGCATTATATCGGTCTATTCACACTTTGATTCCATAGCTGTCCTCAATTTCATTCTTAGTTTATCGGTTGAAGAACAAAATTCCTTGCGACGAGCCCTTAAACAGTACACTCCTCGTATTGAAGTGGACCTAATGAACTTTGTGCAGAGCAAGAAAGAGCGACAGCGATCTAAGTCCTCTTATGACCCATCTGATGTTGTTGGAACATCATCAGAAGAAGGATATATTGGTGCATCAAAGAAGAGTCACTATTTTGGAAGGTATTCTGGTGGTTCTGTTGATAGTGATGGCGGCAGGAAGTGGAGTTCTACCCAAGAATCAACCCTGATATCGGGAAGTATTGGCCAAGCAGCTCCTGATGAAACTCAGGAGAACTTGTATCAGAATTTTGAGACTAGTTCTAATACTGATGTCTATAGTTCAAAAAATAGGGATTCGAATTATGTGGTTGGTTCTACCGGTCTGAACTTGGGATCCCGGCCTGGCCGGCTGGAAAACATGGACAATGGCCTTAACTTTGAAGGGCTGTTGACCCCAGGTATGGACATTAATGGATTGATGAGTTCTGAACCTCTACGTGCTGCTGAAGGCTATGGGCATGACAATAATGTTCTTTCTGAGTTGGACCTTAATAATCATAAACCTGCAGCTGTGAAGATTAATTCTTTGGCTGACACTGGTCCTAGCATTCCTCAAATTCTTCATCTGATATGCAATGGTAATGATGAAAGCCCTACCTCAAGCAAGCGTGGTGCACTTCAGCAGTTAATTGAAGCTTCTATGGCTAACGATCCCTCTGTTTGGTCCAAATACTTCAATCAAATTTTAACGGCTGTACTGGAGGTGTTGGATGATTCTGATTCATCAATCCGAGAACTTACTCTTTCATTGATTGTGGAAATGCTAAAAAATCAGAAAGATGCCATGGAAGATTCTATTGAGATTGCTATTGAGAAGCTGCTTCATGTTACAGAGGATATTGTTCCAAAAGTTTCCAATGAAGCCGAGCACTGCTTGACTGTTGCATTGTCTCAGTATGATCCATTCAGATGCTTAAGTGTGATTGTCCCTTTATTGGTTACTGAAGATGAGAAAACTCTTGTAACCTGCATAAACTGTTTAACTAAGCTTGTGGGTCGTCTTTCACAAGAGGAGCTGATGGTCCAGTTACCATCATTTTTGCCCGCGCTTTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACTGTGGTTTTCTGTCTGGTGGATATATATATCATGCTTGGAAAAGCATTTTTGCCGCACTTGGAAGGGCTTAACAGTACACAGCTGCGTTTGGTGACCATTTATGCTAATCGGATATCACAGGCAAGAACAGGTACTGCAATAGATGCTAGCCATGATTAG
Protein:  
MHRVALIRLFVFQEMYSQAGPQFRDELHRHHLPNSMMKDINARLERIEPQVRPSDGLGGNFAPVEMKPTSLHSKKSSPKAKSSTREISLFGAESDVTEKPIEPIKVYSEKELIREFEKIAATLVPEKDWTIRIAAMQRVEGLVLGGATDYPCFRGLLKQFVGPLNTQLSDRRSSVVKQACHLLCFLSKDLLGDFEACAEMFIPALFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRAAVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFAKTWPERSRRLFMSFDPVIQRIVNEEDGGLHRRHASPSIRDRSAQTSFTPQASAASHVPGYGTSAIVAMDRTSSLSSGTSLSSGLLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLELSDKQNPSALRSSSLDLGVDPPSSRDPPFPASVPASNHLTNSLTAESTASGIGKGSNRNGGLVLSDIITQIQASKDSAKLSYRNNMAAESLPTFSSYSTKRISERGSVEEDNDIREPRRFANPHVDRQYMDTPYKDLNYRDSHSSHIPNFQRPLLRKHVAGRMSAGRRKSFDDSQLSLGEVSSYVEGPASLSDALSEGLSPSSDWNARVAAFNYLHSLLQQGPKGVQEVIQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLEIVSKTYGVDILLPALLRSLDEQRSPKAKLAVIEFALSSFNKHAMNSEGSGNTGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLMNFVQSKKERQRSKSSYDPSDVVGTSSEEGYIGASKKSHYFGRYSGGSVDSDGGRKWSSTQESTLISGSIGQAAPDETQENLYQNFETSSNTDVYSSKNRDSNYVVGSTGLNLGSRPGRLENMDNGLNFEGLLTPGMDINGLMSSEPLRAAEGYGHDNNVLSELDLNNHKPAAVKINSLADTGPSIPQILHLICNGNDESPTSSKRGALQQLIEASMANDPSVWSKYFNQILTAVLEVLDDSDSSIRELTLSLIVEMLKNQKDAMEDSIEIAIEKLLHVTEDIVPKVSNEAEHCLTVALSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMVQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTAIDASHD